BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021G01SP1|AL427802
(694 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1570 1296 0.0
>3x_Contig1570
Length = 12233
Score = 1296 bits (653), Expect = 0.0
Identities = 681/689 (98%), Gaps = 1/689 (0%)
Strand = Plus / Minus
Query: 1 gatcaaatcagccattataccaataccagtgttttcaggaggcaccgaagaatgtcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8629 gatcaaatcagccattataccaataccagtgttttcaggaggcaccgaagaatgtcctcc 8570
Query: 61 ctttgtgttcaactgaattatgctgcttaatgaacccttttcaccaactgccggtaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8569 ctttgtgttcaactgaattatgctgcttaatgaacccttttcaccaactgccggtaaagc 8510
Query: 121 gaaataggtgtcaccaattttctctaccgaacttccaccctcatctacaatggcatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8509 gaaataggtgtcaccaattttctctaccgaacttccaccctcatctacaatggcatatat 8450
Query: 181 cccgtcagtgccatatttgtccataaggtgctcgtttatggtctgggcaccatatccgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8449 cccgtcagtgccatatttgtccataaggtgctcgtttatggtctgggcaccatatccgcc 8390
Query: 241 accaacttcttcgtcaaatccaaatgccaagatcacagtacgctttggttggaatccgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8389 accaacttcttcgtcaaatccaaatgccaagatcacagtacgctttggttggaatccgcc 8330
Query: 301 cttaattaataattccactgattcaaaaaccgaattgaccaaagctttgcaatcagcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8329 cttaattaataattccactgattcaaaaaccgaattgaccaaagctttgcaatcagcaac 8270
Query: 361 acctctaccgaaaagattctcgcccatcaaacgtaccattgtatggtggatacccccatt 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 8269 acctctaccgaaaagattctcg-ccatcaaacgtaccattgtatggtggatacccccatt 8211
Query: 421 gatctatggtttctgcattgaaaggcacgacatcttgatgtcctgctaaaactaaaggct 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 8210 gatctatggtttctgcattgacaggcacgacatcttgatgtcctgctaaaactaaaggct 8151
Query: 481 ttaaactagcatctttcccctcccaaacgtaaaccaaattgtatttgtatttagtttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8150 ttaaactagcatctttcccctcccaaacgtaaaccaaattgtatttgtatttagtttcat 8091
Query: 541 caagtttcaaagtcttatgcactgcagggtacgttttacggaaatagttatgtaaaactg 600
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 8090 caagtttcaaagtcttatgcactgcagggtacgtcttacggaaatagtcatgtaacactg 8031
Query: 601 tgaagttttcatataccttaggaaattcaataggatctagatgagaatgatacgattgag 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 8030 tgaagttttcatataccttaggaaattcaataggatctagatgagaatcatacgattcag 7971
Query: 661 taggaattctaacggatcccaatagtttc 689
||||||||||||||||||| |||||||||
Sbjct: 7970 taggaattctaacggatcctaatagtttc 7942
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4801
Number of Sequences: 1807
Number of extensions: 4801
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 1
length of query: 694
length of database: 10,358,551
effective HSP length: 16
effective length of query: 678
effective length of database: 10,329,639
effective search space: 7003495242
effective search space used: 7003495242
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)